Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015869144.1_cds_XP_016433668.1_29804
CDS Infomation

[gene=LOC107760165] [db_xref=GeneID:107760165] [protein=putative U-box domain-containing protein 50 isoform X2] [protein_id=XP_016433668.1] [location=complement(join(66184..66381,66963..67667,68243..68782,68872..69012,69945..70359,70574..70647))] [gbkey=CDS]
Sequence

ATGGTGGATTTGATCACTGGTCTTAGGATAACAAAATTGGTCATGTCATTGACTTTCATG
AAGTCTTCATCATGGAAATCAAGAAGTGCAATAAGTGGATCATTTTTTGTGCATAGACAA
AAGCCAGAATTCTGTGAATTATTTATAATATGTGGAGGGAAGTTGGTTTTTCTAAGGGAA
AGAAATAATGAAGGATTAATCGAAGATGATCAAGGAGAAATGGTCGCAAATTCAAGATCA
AAGAGGCAAAGTTTTAAAGATTTGGTTGTAAAAATGTTCCCTGAAAACAACAGTGCCAAA
ATGAAAAATTCATGTGATTCACCTTCTTCAGCAAGCAATAGCTCAGTTGATCAATGGGAA
AAGTATAAAGATGAAATTGAGAATTACATGAGTCAAATATTATCTTCAAATGCAGAGGAA
ATTGATGATTTTATTGCAAATGAAAATCTCCAGAATAGCATTACAGAGTTTGTTATGGCT
GATAATTTGACTTTGCAAGAAAAGAGAGAAGCTGTGAAAATCAAGTTTCTGGAGATCAAA
CAAACAATACAACTAAGCAGAGAAGAAGCAAAAGGCCATGTTAGAGGACATGCTAAGGCT
CAGTGGGCTACCACACTATGTACTAGAAGGGCTGAGGAAATTGATGGTTGCATAAATGAT
GAAATCGCGCGAAAGGCTGATCTAAAGAGGGAGTTAGATGCCACAAAAGAAGAGATCAGT
GAACTTCATACTGAAGTTGAGATCACGACGAGTAGACTCAACTCAATTCTTGAACTACAA
GGCGAGCTCTCAAACAAGCTGCAGCTATCTTCTGTGGCAAGATCACGTGCTGAGGTCAAA
GTGGAAAAAGTAGTGAAGCAAAGAACAGATACACTTCAGGAAATTGAGGAGTATAGAAAG
CAAAGAGATGTTCTACGACGAAGGATAGAGTTTTGTAGGGAAAAAGACGCGATAGGAAAT
GCTACAATGCTGATAAAACCGAGTTTTGAGTACAAGGAGTTCACTGCTGCAGAAATTAGA
GCAGCTACAGATGGATTTTCGGATCGTATGAGGTTGAAATCTGGTGGTGATTGGACTGAT
GTGTATAAAGCTAGGCTTAATCACACATCAGTTGCAATTAAACTGTATAGTTCAGGTGAT
GTAGATTCTGCAGATGCCTTCCGAGCTAAGGTGAAGCTCTTCAGCCACATGAAGCATCCT
CATATACTATCGATGATCGGATTTTGTTCTGAGCTAAGGTGCATTGTGTTTGAGTATATG
CACAATGGCTGCTTAAGAGACATTCTCTTCTCAAGCAAGAGAAGCTCTAAAAGGAGAAAC
AAGTGTCTAAACTGGCAAGCTAGGATATGCATTGCAGCCAATGTTTGTACGGGCCTATGC
TACCTTCATCGGGCAAAGCCGAGGCCCGTGGCTCATGGCAACCTCAACCCTTCAAAAATC
CTTCTTGATCGTAATAATGTGGCGAACATCCATGGTTTTAGGACACCTTTGTCTTTTGAT
AAATCGGATATAAGATCAGATATCCGGGCTTATGGGAACTTAGTCTTACAGATTCTGACA
GGGAGAAACTGGGCCGGGCTTGTCGAGGAGGCGATCATGATGGACCAGACTAAGCTTATT
GAAGTACTTGATCCGATGGCCGGAGAGTGGCCATTGGATATAGCACTTGAGCTTGGAAGA
ATAGGAATAAAGTGTTTGTCTATTCATGAAGATAAGGAGTTAAACATGACTAGTTTGGCA
AGAGAAGTAGAGAAAGTGAAGAAATTAGCTGATGAAATAGTAGCAAATGGTGAATGTGTT
GTGGCAAATGACAGAAATCAAGATGATGAAGACTCAGGAGAGTTCCCTAATTTCTTCCTT
TGCCCCATTTTGCAGGAAGTGATGAAGAATCCACATGTTGCAGCTGATGGATTTTCATAT
GAGCTAGAAGCCATAGAAGAATGGCTAAAAACTGGAAGAGATACATCACCAATGACAAAT
TTAAGGCTCAACGACAAGCTTCTCACACCTAATCATAGTTTACGGTCTCTAATCGAAGAT
TTGCAAAAGAAAAGATCAATTTCTATCAGATAG

Peptide Sequence

PEP ID

XP_016433668.1
PEP Infomation

PREDICTED: putative U-box domain-containing protein 50 isoform X2 [Nicotiana tabacum]
Sequence

MVDLITGLRITKLVMSLTFMKSSSWKSRSAISGSFFVHRQKPEFCELFIICGGKLVFLRE
RNNEGLIEDDQGEMVANSRSKRQSFKDLVVKMFPENNSAKMKNSCDSPSSASNSSVDQWE
KYKDEIENYMSQILSSNAEEIDDFIANENLQNSITEFVMADNLTLQEKREAVKIKFLEIK
QTIQLSREEAKGHVRGHAKAQWATTLCTRRAEEIDGCINDEIARKADLKRELDATKEEIS
ELHTEVEITTSRLNSILELQGELSNKLQLSSVARSRAEVKVEKVVKQRTDTLQEIEEYRK
QRDVLRRRIEFCREKDAIGNATMLIKPSFEYKEFTAAEIRAATDGFSDRMRLKSGGDWTD
VYKARLNHTSVAIKLYSSGDVDSADAFRAKVKLFSHMKHPHILSMIGFCSELRCIVFEYM
HNGCLRDILFSSKRSSKRRNKCLNWQARICIAANVCTGLCYLHRAKPRPVAHGNLNPSKI
LLDRNNVANIHGFRTPLSFDKSDIRSDIRAYGNLVLQILTGRNWAGLVEEAIMMDQTKLI
EVLDPMAGEWPLDIALELGRIGIKCLSIHEDKELNMTSLAREVEKVKKLADEIVANGECV
VANDRNQDDEDSGEFPNFFLCPILQEVMKNPHVAADGFSYELEAIEEWLKTGRDTSPMTN
LRLNDKLLTPNHSLRSLIEDLQKKRSISIR

Transcript Sequence

Gene sequence data has not been registered.